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MCEER is headquartered at the University at Buffalo, State University of New York and was primarily supported by the Earthquake Engineering Research Centers Program of the National Science Foundation, under award number EEC-9701471.

MCEER derives support from several federal agencies, including the National Science Foundation, Federal Highway Administration, National Institute of Standards and Technology, Department of Homeland Security (DHS)/Federal Emergency Management Agency (FEMA), and the State of New York, other state governments, academic institutions, foreign governments and private industry.